BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D03LP1|AL426996
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig265 1015 0.0
3x_Contig856 131 3e-30
>3x_Contig265
Length = 1170
Score = 1015 bits (490), Expect = 0.0
Identities = 605/678 (89%), Gaps = 1/678 (0%)
Strand = Plus / Minus
Query: 118 aatcgcctctatttcagttcaacttgggttaatgaaaattcatgctagcgcyataacmat 177
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 1170 aatcgcctctatntcagttcaacttgggttaatgaaaattcatgctagcgctataacaat 1111
Query: 178 ccmttaaccmttgagctaatgtgctcgttgatgaagttggttggttatggragagtgata 237
|| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1110 ccattaaccattgagctaatgtgctcgttgatgaagttggttggttatggaagagtgata 1051
Query: 238 attgttttwtattatcgcctacyaatacagacttatatathahmcmtactaaccyttgtt 297
|||||||| ||||||||| ||| ||||||||||||||||| | |||||||| |||||
Sbjct: 1050 attgttttatattatcgcatactaatacagacttatatataaaaaatactaacctttgtt 991
Query: 298 aaatataatammaathamaccmacymagttttatgattcgcmggtaagtgamaacstggt 357
|||||||||| ||| | ||| || ||||||||||||||| ||||||||| ||| ||||
Sbjct: 990 aaatataataaaaataaaaccaactaagttttatgattcgcaggtaagtgaaaacgtggt 931
Query: 358 ggccygccccycctcccmtmttcygagammmmtgaagtttgttagngnaaattaccattg 417
| || ||||| | ||| | ||| |||| ||||||||||||| | ||||||| ||||
Sbjct: 930 gacctgcccctcatcctatattctgagaaaaatgaagtttgttagagaaaattacaattg 871
Query: 418 amtattttcttkamgggggggnccaggtntcctgncatgttaccmmmacccmmtggsaag 477
| ||||||||| | ||| || | |||| || || ||||||| ||| ||| |||
Sbjct: 870 aatattttcttgaagggaggtacaaggtatcatgaaatgttacaaaaaccaaatggaaag 811
Query: 478 agtgggcatwatwaaatwtkacagctctttwgttkttattttgtaggtattgatcaggat 537
||||| ||| || |||| | |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 810 agtggacataataaaatatgacagctctttagttgttattttgtaggtattgatcaggat 751
Query: 538 caatccwtatcttcatcatcaccgctatgatgttgacgtatttcatcgtcaagtggcaat 597
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 caatccttatcttcatcatcaccgctatgatgttgacgtatttcatcgtcaagtggcaat 691
Query: 598 gaggcttctggatatccaacgagttctttwcagatcacattaatagtttttcgtttktat 657
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 690 gaggcttctggatatccaacgagttctttacagatcacattaatagtttttcgtttgtat 631
Query: 658 tkgcgaactgtagtcctgactttttcgtataataatttcaactcagtaccagtccatctt 717
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tggcgaactgtagtcctgactttttcgtataataatttcaactcagtaccagtccatctt 571
Query: 718 ctaccaggcattaaggkagataattcttcccaatccacttgagaatcctctgtgaaa-cc 776
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 570 ctaccaggcattaaggtagataattcttcccaatccacttgagaatcctctgtgaaaccc 511
Query: 777 atatctcttwatttagtt 794
||||||||| ||||||||
Sbjct: 510 atatctcttaatttagtt 493
>3x_Contig856
Length = 2522
Score = 131 bits (63), Expect = 3e-30
Identities = 114/131 (87%)
Strand = Plus / Minus
Query: 1 gatctctcggcagaaggaatctgtatatattttacctttccttcttatcgttgtgctttt 60
|||||||||||||||||||||||||||||||||||||| || | |||||| ||||||||
Sbjct: 142 gatctctcggcagaaggaatctgtatatattttaccttaccatattatcgaagtgctttt 83
Query: 61 gatataaaatagccagaattaatgaatcaaagtaactggacagataaaaaaaactaaaat 120
| |||||||||||| || ||| |||||||||| | || ||| ||||||||||| ||||
Sbjct: 82 aaaataaaatagccaaaaataaagaatcaaagtttcagggcagttaaaaaaaacttaaat 23
Query: 121 cgcctctattt 131
| |||||||||
Sbjct: 22 cccctctattt 12
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.720 1.36
Gapped
Lambda K H
1.44 0.720 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4264
Number of Sequences: 1807
Number of extensions: 4264
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 2
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.0 bits)
S1: 11 (23.3 bits)
S2: 48 (99.9 bits)